Cytogenetics Lab, Institute of Mother and Child, in cooperation with CompBio group at the University of Warsaw, presents a demo of a research & clinical tool IMID2py now empowered with Apache Stanbol.
Linked data from life sciences is a substantial part of the LOD cloud [1], it contains most interlinks. With the use of Apache Stanbol components: Entityhub, Contenthub, Enhancer, we proposed a solution which allows our users geneticists to:
- annotate medical content (i.e. a result from genetic experiment) with relevant data
- formulate various queries, use several provided enhancers, search indexed LOD entities with VIE auto-complete
- search among tagged annotations, with facets provided by Stanbol Contenthub
Tree of enhancements
In our solution, user creates a tree of enhancements for her/his content: this is a small part of a LOD cloud which users find relevant. A user is able to search for enhancements thanks to Entityhub with pre-indexed linked data from large open databases: UNIPROT, PubMed, eHealth.


As we approach the end of the official IKS project phase (end of 2012) it is time to shift our focus and effort towards ensuring that the results continue to provide value beyond 2012 to a broad community.